SHAMAN: a user-friendly website for metataxonomic analysis from raw reads to statistical analysis - Institut Pasteur Access content directly
Journal Articles BMC Bioinformatics Year : 2020

SHAMAN: a user-friendly website for metataxonomic analysis from raw reads to statistical analysis

Abstract

Comparing the composition of microbial communities among groups of interest (e.g., patients vs healthy individuals) is a central aspect in microbiome research. It typically involves sequencing, data processing, statistical analysis and graphical display. Such an analysis is normally obtained by using a set of different applications that require specific expertise for installation, data processing and in some cases, programming skills.
Fichier principal
Vignette du fichier
s12859-020-03666-4.pdf (1.1 Mo) Télécharger le fichier
Origin : Publication funded by an institution
Loading...

Dates and versions

pasteur-02951458 , version 1 (28-09-2020)

Licence

Attribution

Identifiers

Cite

Stevenn Volant, Pierre Lechat, Perrine Woringer, Laurence Motreff, Pascal Campagne, et al.. SHAMAN: a user-friendly website for metataxonomic analysis from raw reads to statistical analysis. BMC Bioinformatics, 2020, 21 (1), pp.345. ⟨10.1186/s12859-020-03666-4⟩. ⟨pasteur-02951458⟩
80 View
305 Download

Altmetric

Share

Gmail Facebook X LinkedIn More