checkMyIndex: a web-based R/Shiny interface for choosing compatible sequencing indexes - Institut Pasteur Access content directly
Journal Articles Bioinformatics Year : 2019

checkMyIndex: a web-based R/Shiny interface for choosing compatible sequencing indexes

Abstract

When sequencing several libraries simultaneously, the selection of compatible combinations of indexes is critical for ensuring that the sequencer will be able to decipher the short, sample-specific barcodes added to each fragment. However, researchers have few tools to help them choose optimal indexes. Here, we present checkMyIndex, an online R/Shiny application that facilitates the selection of the right indexes as a function of the experimental constraints.
Fichier principal
Vignette du fichier
bty706.pdf (636.79 Ko) Télécharger le fichier
Loading...

Dates and versions

pasteur-02557485 , version 1 (28-04-2020)

Licence

Attribution - NonCommercial

Identifiers

Cite

Hugo Varet, Jean-Yves Coppée. checkMyIndex: a web-based R/Shiny interface for choosing compatible sequencing indexes. Bioinformatics, 2019, 35 (5), pp.901-902. ⟨10.1093/bioinformatics/bty706⟩. ⟨pasteur-02557485⟩
28 View
61 Download

Altmetric

Share

Gmail Facebook X LinkedIn More