Closed and high quality bacterial genomes of the Oligo Mouse Microbiota community

The Oligo-Mouse-Microbiota (OMM 12) gnotobiotic murine model is an increasingly popular model for microbiota studies. However, following Illumina and PacBio sequencing, the genomes of the 12 strains could not be closed. Here, we used genomic chromosome conformation capture (Hi-C) data to reorganize, close and improve the quality of these 12 genomes.

Domaines

Microbiologie et Parasitologie Sciences du Vivant [q-bio]

Fichier principal

Microbiology Resource Announcements-2021-Lamy-Besnier-e01396-20.full.pdf (283.76 Ko)

Origine	Publication financée par une institution

Ana Cova Rodrigues : Connectez-vous pour contacter le contributeur

https://pasteur.hal.science/pasteur-03204821

Soumis le : mercredi 21 avril 2021-19:15:51

Dernière modification le : mercredi 17 avril 2024-11:02:03

Archivage à long terme le : jeudi 22 juillet 2021-19:32:17

Dates et versions

pasteur-03204821 , version 1 (21-04-2021)

Licence

Paternité

Identifiants

HAL Id : pasteur-03204821 , version 1
DOI : 10.1128/MRA.01396-20
PUBMED : 33927045

Citer

Quentin Lamy-Besnier, Romain Koszul, Laurent Debarbieux, Martial Marbouty. Closed and high quality bacterial genomes of the Oligo Mouse Microbiota community. Microbiology Resource Announcements, 2021, 10 (17), pp.e01396-20. ⟨10.1128/MRA.01396-20⟩. ⟨pasteur-03204821⟩

Exporter

BibTeX XML-TEI Dublin Core DC Terms EndNote DataCite

Collections

PASTEUR CNRS ANR SPATIAL-REGULATION-GENOMES UMR3525

35 Consultations

53 Téléchargements