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Structure: Internal structure identifier : 1090768
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Epidemic models: why and how to use them

Mircea T Sofonea , Simon Cauchemez , Pierre-Yves Boëlle
Anaesthesia Critical Care & Pain Medicine, 2022, 41 (2), pp.101048. ⟨10.1016/j.accpm.2022.101048⟩
Journal articles hal-03638186v1
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An ensemble model based on early predictors to forecast COVID-19 health care demand in France

Juliette Paireau , Alessio Andronico , Nathanaël El Hoz , Maylis Layan , Pascal Crepey , et al.
Proceedings of the National Academy of Sciences of the United States of America, 2022, 119 (18), pp.e2103302119. ⟨10.1073/pnas.2103302119⟩
Journal articles pasteur-03690824v3
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Analytical framework to evaluate and optimize the use of imperfect diagnostics to inform outbreak response: Application to the 2017 plague epidemic in Madagascar

Quirine ten Bosch , Voahangy Andrianaivoarimanana , Beza Ramasindrazana , Guillain Mikaty , Rado J L Rakotonanahary , et al.
PLoS Biology, 2022, 20 (8), pp.e3001736. ⟨10.1371/journal.pbio.3001736⟩
Journal articles pasteur-04094929v1
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Estimated protection against COVID-19 based on predicted neutralisation titres from multiple antibody measurements in a longitudinal cohort, France, April 2020 to November 2021

Tom Woudenberg , Laurie Pinaud , Laura Garcia , Laura Tondeur , Stephane Pelleau , et al.
Eurosurveillance, 2023, 28 (25), ⟨10.2807/1560-7917.ES.2023.28.25.2200681⟩
Journal articles hal-04146212v1
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SARS-CoV-2 transmission across age groups in France and implications for control

Cécile Tran Kiem , Paolo Bosetti , Juliette Paireau , Pascal Crepey , Henrik Salje , et al.
Preprints, Working Papers, ... pasteur-03170966v2
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Modeling the impact of national and regional lockdowns on the 2020 spring wave of COVID-19 in France

Jonathan Roux , Clément Massonnaud , Vittoria Colizza , Simon Cauchemez , Pascal Crepey
Scientific Reports, 2023, 13 (1), pp.1834. ⟨10.1038/s41598-023-28687-w⟩
Journal articles hal-03977474v1
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Measuring Basic Reproduction Number to Assess Effects of Nonpharmaceutical Interventions on Nosocomial SARS-CoV-2 Transmission

George Shirreff , Jean-Ralph Zahar , Simon Cauchemez , Laura Temime , Lulla Opatowski
Emerging Infectious Diseases, 2022, 28 (7), pp.1345-1354. ⟨10.3201/eid2807.212339⟩
Journal articles hal-03761483v1
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Assessing the feasibility of Nipah vaccine efficacy trials based on previous outbreaks in Bangladesh

Birgit Nikolay , Gabriel Ribeiro dos Santos , Marc Lipsitch , Mahmudur Rahman , Stephen P. Luby , et al.
Vaccine, 2021, pp.In Press, Corrected Proof. ⟨10.1016/j.vaccine.2021.08.027⟩
Journal articles pasteur-03338894v1
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Impact of SARS-CoV-2 Delta variant on incubation, transmission settings and vaccine effectiveness: Results from a nationwide case-control study in France

Rebecca Grant , Tiffany Charmet , Laura Schaeffer , Simon Galmiche , Yoann Madec , et al.
The Lancet Regional Health - Europe, 2022, 13, pp.100278. ⟨10.1016/j.lanepe.2021.100278⟩
Journal articles pasteur-03683497v1
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Quantitative evaluation of the infection dynamics of bovine brucellosis in Tanzania

Makoto Ukita , Nathanael Hozé , Takahiro Nemoto , Simon Cauchemez , Shingo Asakura , et al.
Preventive Veterinary Medicine, 2021, 194, pp.105425. ⟨10.1016/j.prevetmed.2021.105425⟩
Journal articles hal-04095266v1
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Reconstructing antibody dynamics to estimate the risk of influenza virus infection

Tim K Tsang , Ranawaka a P M Perera , Vicky J Fang , Jessica Y Wong , Eunice Y Shiu , et al.
Nature Communications, 2022, 13 (1), pp.1557. ⟨10.1038/s41467-022-29310-8⟩
Journal articles pasteur-04095291v1
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Seroepidemiology of enterovirus A71 infection in prospective cohort studies of children in southern China, 2013-2018

Juan Yang , Qiaohong Liao , Kaiwei Luo , Fengfeng Liu , Yonghong Zhou , et al.
Nature Communications, 2022, 13 (1), pp.7280. ⟨10.1038/s41467-022-34992-1⟩
Journal articles pasteur-04095401v1
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Epidemiology and control of SARS-CoV-2 epidemics in partially vaccinated populations: a modeling study applied to France

Paolo Bosetti , Cécile Tran Kiem , Alessio Andronico , Vittoria Colizza , Yazdan Yazdanpanah , et al.
BMC Medicine, 2022, 20 (1), pp.33. ⟨10.1186/s12916-022-02235-1⟩
Journal articles hal-03906324v3
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Reconstructing Mayotte 2018–19 Rift Valley Fever outbreak in humans by combining serological and surveillance data

Jonathan Bastard , Guillaume André Durand , Fanny Parenton , Youssouf Hassani , Laure Dommergues , et al.
Communications Medicine, 2022, 2, pp.163. ⟨10.1038/s43856-022-00230-4⟩
Journal articles pasteur-03926740v1
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Managing COVID-19 importation risks in a heterogeneous world

Simon Cauchemez , Cécile Tran Kiem
The Lancet Public Health, 2021, 6 (9), pp.e626-e627. ⟨10.1016/S2468-2667(21)00188-2⟩
Journal articles pasteur-03326003v1
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On the Use of Phylogeographic Inference to Infer the Dispersal History of Rabies Virus: A Review Study

Kanika D Nahata , Nena Bollen , Mandev S Gill , Maylis Layan , Hervé Bourhy , et al.
Viruses, 2021, 13 (8), pp.1628. ⟨10.3390/v13081628⟩
Journal articles hal-03351572v1
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Impact of booster vaccination on the control of COVID-19 in the context of waning immunity: Application to France in the autumn-winter 2021-2022

Paolo Bosetti , Cécile Tran Kiem , Alessio Andronico , Juliette Paireau , Daniel Levy-Bruhl , et al.
Preprints, Working Papers, ... pasteur-03482686v1
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Impact of booster vaccination on the control of COVID-19 Delta wave in the context of waning immunity: application to France in the winter 2021/22

Paolo Bosetti , Cécile Tran Kiem , Alessio Andronico , Juliette Paireau , Daniel Levy-Bruhl , et al.
Eurosurveillance, 2022, 27 (1), ⟨10.2807/⟩
Journal articles hal-03518970v1
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Mosquito diversity (Diptera: Culicidae) and medical importance in four Cambodian forests

Antsa Rakotonirina , Pierre-Olivier Maquart , Claude Flamand , Chea Sokha , Sébastien Boyer
Parasites & Vectors, 2023, 16 (1), pp.110. ⟨10.1186/s13071-023-05729-w⟩
Journal articles pasteur-04133411v1
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Ecology, evolution, and epidemiology of zoonotic and vector-borne infectious diseases in French Guiana: Transdisciplinarity does matter to tackle new emerging threats

Benoît de Thoisy , Olivier Duron , Loïc Epelboin , Lise Musset , Philippe Quénel , et al.
Infection, Genetics and Evolution, 2021, 93, pp.104916. ⟨10.1016/j.meegid.2021.104916⟩
Journal articles pasteur-03261181v1
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Association between the COVID-19 pandemic and pertussis derived from multiple nationwide data sources, France, 2013 to 2020

Soraya Matczak , Corinne Levy , Camille Fortas , Jérémie Cohen , Stéphane Béchet , et al.
Eurosurveillance, 2022, 27 (25), pp.2100933. ⟨10.2807/1560-7917.ES.2022.27.25.2100933⟩
Journal articles pasteur-03930066v1
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The transfer of maternal antibodies and dynamics of maternal and natural infection-induced antibodies against coxsackievirus A16 in Chinese children 0–13 years of age: a longitudinal cohort study

Jiaxin Zhou , Yonghong Zhou , Kaiwei Luo , Qiaohong Liao , Wen Zheng , et al.
BMC Medicine, 2022, 20 (1), pp.436. ⟨10.1186/s12916-022-02604-w⟩
Journal articles pasteur-04095410v1
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Evaluating the impact of curfews and other measures on SARS-CoV-2 transmission in French Guiana

Alessio Andronico , Cécile Tran Kiem , Juliette Paireau , Tiphanie Succo , Paolo Bosetti , et al.
Nature Communications, 2021, 12 (1), pp.1634. ⟨10.1038/s41467-021-21944-4⟩
Journal articles hal-03184273v1
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Agent-based modelling of reactive vaccination of workplaces and schools against COVID-19

Benjamin Faucher , Rania Assab , Jonathan Roux , Daniel Levy-Bruhl , Cécile Tran Kiem , et al.
Nature Communications, 2022, 13 (1), pp.1414. ⟨10.1038/s41467-022-29015-y⟩
Journal articles hal-03615409v1
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SARS-CoV-2 transmission across age groups in France and implications for control

Cécile Tran Kiem , Paolo Bosetti , Juliette Paireau , Pascal Crepey , Henrik Salje , et al.
Nature Communications, 2021, 12 (1), pp.6895. ⟨10.1038/s41467-021-27163-1⟩
Journal articles hal-03468461v1
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Lockdown impact on age-specific contact patterns and behaviours, France, April 2020

Paolo Bosetti , Bich-Tram Huynh , Armiya Youssouf Abdou , Marie Sanchez , Catherine Eisenhauer , et al.
Eurosurveillance, 2021, 26 (48), pp.2001636. ⟨10.2807/1560-7917.ES.2021.26.48.2001636⟩
Journal articles pasteur-03464765v1
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Modéliser la propagation et le contrôle du SARS-CoV-2 en France

Cécile Tran Kiem
Santé publique et épidémiologie. Sorbonne Université, 2022. Français. ⟨NNT : 2022SORUS092⟩
Theses tel-03773621v1
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Model-based assessment of Chikungunya and O’nyong-nyong virus circulation in Mali in a serological cross-reactivity context

Nathanaël Hozé , Issa Diarra , Abdoul Karim Sangaré , Boris Pastorino , Laura Pezzi , et al.
Nature Communications, 2021, 12 (1), pp.6735. ⟨10.1038/s41467-021-26707-9⟩
Journal articles pasteur-03511907v1
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Screening and vaccination against COVID-19 to minimise school closure: a modelling study

Elisabetta Colosi , Giulia Bassignana , Diego Andrés Contreras , Canelle Poirier , Pierre-Yves Boëlle , et al.
The Lancet Infectious Diseases, 2022, 22 (7), pp.977-989. ⟨10.1016/S1473-3099(22)00138-4⟩
Journal articles hal-03707164v1
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Transmission of Antimicrobial Resistant Yersinia pestis during a Pneumonic Plague Outbreak

Voahangy Andrianaivoarimanana , David M Wagner , Dawn N Birdsell , Birgit Nikolay , Faniry Rakotoarimanana , et al.
Clinical Infectious Diseases, 2022, 74 (4), pp.695 - 702. ⟨10.1093/cid/ciab606⟩
Journal articles pasteur-04095182v1