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Ability of epidemiological studies to monitor HPV post-vaccination dynamics: a simulation study

Mélanie Bonneault , Elisabeth Delarocque-Astagneau , Maxime Flauder , J.A. Bogaards , Didier Guillemot , et al.
Epidemiology and Infection, 2023, 151, pp.e31. ⟨10.1017/S0950268823000122⟩
Journal articles hal-04122781v1
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Vaccination Coverage and Risk Factors Associated With Incomplete Vaccination Among Children in Cambodia, Madagascar, and Senegal

Florian Verrier , Agathe de Lauzanne , Jean-Baptiste Niokhhor Diouf , Andrianirina Zafitsara Zo , Lison Ramblière , et al.
Open Forum Infectious Diseases, 2023, 10 (4), pp.ofad136. ⟨10.1093/ofid/ofad136⟩
Journal articles pasteur-04064702v1

Short treatment duration for community-acquired pneumonia

Aurélien Dinh , Anne Claude Crémieux , Didier Guillemot
Current Opinion in Infectious Diseases, 2023, 36 (2), pp.140-145. ⟨10.1097/QCO.0000000000000908⟩
Journal articles hal-04068576v1
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SARS-CoV-2 transmission across age groups in France and implications for control

Cécile Tran Kiem , Paolo Bosetti , Juliette Paireau , Pascal Crepey , Henrik Salje , et al.
Preprints, Working Papers, ... pasteur-03170966v2
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Retrospective analysis of SARS-CoV-2 omicron invasion over delta in French regions in 2021–22: a status-based multi-variant model

Thomas Haschka , Elisabeta Vergu , Benjamin Roche , Chiara Poletto , Lulla Opatowski
BMC Infectious Diseases, 2022, 22 (1), pp.815. ⟨10.1186/s12879-022-07821-5⟩
Journal articles hal-03888881v1
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Defining genomic epidemiology thresholds for common-source bacterial outbreaks: a modelling study

Audrey Duval , Lulla Opatowski , Sylvain Brisse
The Lancet Microbe, 2023, 4 (5), pp.e349-e357. ⟨10.1016/S2666-5247(22)00380-9⟩
Journal articles hal-04107710v1
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From Pathophysiological Hypotheses to Case–Control Study Design: Resistance from Antibiotic Exposure in Community-Onset Infections

Salam Abbara , Didier Guillemot , Christian Brun-Buisson , Laurence Watier
Antibiotics, 2022, 11 (2), pp.201. ⟨10.3390/antibiotics11020201⟩
Journal articles hal-03579480v1
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Inappropriate antibiotic prescribing and its determinants among outpatient children in 3 low- and middle-income countries: A multicentric community-based cohort study

Antoine Ardillon , Lison Ramblière , Elsa Kermorvant-Duchemin , Touch Sok , Andrianirina Zafitsara Zo , et al.
PLoS Medicine, 2023, 20 (6), pp.e1004211. ⟨10.1371/journal.pmed.1004211⟩
Journal articles pasteur-04122106v1
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Determinants of worldwide antibiotic resistance dynamics across drug-bacterium pairs: a multivariable spatial-temporal analysis using ATLAS

Eve Rahbe , Laurence Watier , Didier Guillemot , Philippe Glaser , Lulla Opatowski
Lancet Planetary Health , 2023, 7 (7), pp.e547-e557. ⟨10.1016/S2542-5196(23)00127-4⟩
Journal articles hal-04191728v1
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Deep Learning From Phylogenies To Uncover The Epidemiological Dynamics Of Outbreaks

J. Voznica , A. Zhukova , V. Boskova , E. Saulnier , F. Lemoine , et al.
Nature Communications, 2022, 13 (1), pp.3896. ⟨10.1038/s41467-022-31511-0⟩
Journal articles hal-03861407v1
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SARS-CoV-2 transmission across age groups in France and implications for control

Cécile Tran Kiem , Paolo Bosetti , Juliette Paireau , Pascal Crepey , Henrik Salje , et al.
Nature Communications, 2021, 12 (1), pp.6895. ⟨10.1038/s41467-021-27163-1⟩
Journal articles hal-03468461v1
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Microbiome-pathogen interactions drive epidemiological dynamics of antibiotic resistance: A modeling study applied to nosocomial pathogen control

David Rm Smith , Laura Temime , Lulla Opatowski
eLife, 2021, 10, pp.e68764. ⟨10.7554/eLife.68764⟩
Journal articles hal-03500623v1
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Stillbirths and neonatal mortality in LMICs: A community-based mother-infant cohort study

Lison Rambliere , Agathe de Lauzanne , Jean-Baptiste Diouf , Andrianirina Zafitsara Zo , Myriam Landau , et al.
Journal of Global Health, 2023, 13, pp.04031. ⟨10.7189/jogh.13.04031⟩
Journal articles pasteur-04072424v1
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Outpatient Antibiotic Prescriptions in France: Patients and Providers Characteristics and Impact of the COVID-19 Pandemic

Wilfried Bara , Christian Brun-Buisson , Bruno P. Coignard , Laurence Watier
2022, 11 (5), pp.643. ⟨10.3390/antibiotics11050643⟩
Journal articles hal-03772586v1
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Rapid antigen testing as a reactive response to surges in nosocomial SARS-CoV-2 outbreak risk

David R. M. Smith , Audrey Duval , Jean Ralph Zahar , Niels Hendrickx , Kévin Jean , et al.
Nature Communications, 2022, 13 (1), pp.236. ⟨10.1038/s41467-021-27845-w⟩
Journal articles hal-03615649v1
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Collateral impacts of pandemic COVID-19 drive the nosocomial spread of antibiotic resistance: A modelling study

David R M Smith , George Shirreff , Laura Temime , Lulla Opatowski
PLoS Medicine, 2023, 20 (6), pp.e1004240. ⟨10.1371/journal.pmed.1004240⟩
Journal articles hal-04142121v1
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The interactions of SARS-CoV-2 with cocirculating pathogens: Epidemiological implications and current knowledge gaps

Anabelle Wong , Laura Andrea Barrero Guevara , Elizabeth Goult , Michael Briga , Sarah C. Kramer , et al.
PLoS Pathogens, 2023, 19 (3), ⟨10.1371/journal.ppat.1011167⟩
Journal articles hal-04069312v1
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Non-traumatic coma in young children in Benin: are viral and bacterial infections gaining ground on cerebral malaria?

Josselin Brisset , Karl Angendu Baki , Laurence Watier , Elisée Kinkpé , Justine Bailly , et al.
Infectious Diseases of Poverty, 2022, 11 (1), pp.29. ⟨10.1186/s40249-022-00956-2⟩
Journal articles hal-03611546v1
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Modelling the impact of antimicrobial use and external introductions on commensal E. coli colistin resistance in small‐scale chicken farms of the Mekong delta of Vietnam

Jonathan Bastard , Nguyen Thi Nhung , Vo Be Hien , Bach Tuan Kiet , Laura Temime , et al.
Transboundary and emerging diseases, 2022, 69 (5), pp.e2185-e2194. ⟨10.1111/tbed.14558⟩
Journal articles hal-03813343v1

Excess risk of subsequent infection in hospitalized children from a community cohort study in Cambodia and Madagascar

Lison Rambliere , Elsa Kermorvant-Duchemin , Agathe de Lauzanne , Jean-Marc Collard , Perlinot Herindrainy , et al.
International Journal of Epidemiology, 2022, 51 (5), pp.1421-1431. ⟨10.1093/ije/dyac048⟩
Journal articles pasteur-03622472v1
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Impact of non-pharmaceutical interventions on SARS-CoV-2 outbreaks in English care homes: a modelling study

Alicia Rosello , Rosanna C. Barnard , David R. M. Smith , Stephanie Evans , Fiona Grimm , et al.
BMC Infectious Diseases, 2022, 22 (1), pp.324. ⟨10.1186/s12879-022-07268-8⟩
Journal articles hal-03642587v1
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Antimicrobial stewardship in high-risk febrile neutropenia patients

Adrien Contejean , Salam Abbara , Ryme Chentouh , Sophie Alviset , Éric Grignano , et al.
Antimicrobial Resistance and Infection Control, 2022, 11 (1), pp.52. ⟨10.1186/s13756-022-01084-0⟩
Journal articles hal-03888911v1
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Non-pharmaceutical interventions and COVID-19 vaccination strategies in Senegal: a modelling study

Maryam Diarra , Amira Kebir , Cheikh Talla , Aliou Barry , Joseph Faye , et al.
BMJ Global Health, 2022, 7 (2), pp.e007236. ⟨10.1136/bmjgh-2021-007236⟩
Journal articles pasteur-03597342v1
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Sick leave due to COVID-19 during the first pandemic wave in France, 2020

David Smith , Sofía Jijón , Ajmal Oodally , George Shirreff , Karim Aït Bouziad , et al.
Occupational and Environmental Medicine, 2023, 80 (5), pp.268-272. ⟨10.1136/oemed-2022-108451⟩
Journal articles hal-04062254v1

How have mathematical models contributed to understanding the transmission and control of SARS-CoV-2 in healthcare settings? A systematic search and review

David R.M. Smith , Sophie Chervet , Théo Pinettes , George Shirreff , Sofía Jijón , et al.
Journal of Hospital Infection, In press, ⟨10.1016/j.jhin.2023.07.028⟩
Journal articles hal-04224124v1