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Leveraging the partition selection bias to achieve a high-quality clustering of mass spectra
André R.F. Silva
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Diogo Lima
,
Louise Kurt
,
Mathieu Dupré
,
Julia Chamot-Rooke
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et al.
Journal articles
pasteur-03441752v1
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Proteomic Analysis of Intact Flagella of Procyclic Trypanosoma brucei Cells Identifies Novel Flagellar Proteins with Unique Sub-localization and Dynamics
Ines Subota
,
Daria Julkowska
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Laetitia Vincensini
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Nele Reeg
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Johanna Buisson
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et al.
Journal articles
pasteur-01301216v1
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Salmonella antibacterial Rhs polymorphic toxin inhibits translation through ADP-ribosylation of EF-Tu P-loop
Dukas Jurėnas
,
Martial Rey
,
Deborah Byrne
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Julia Chamot-Rooke
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Laurent Terradot
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et al.
Journal articles
hal-04009485v1
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Comparing Top-Down Proteoform Identification: Deconvolution, PrSM Overlap, and PTM Detection
David Tabb
,
Kyowon Jeong
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Karen Druart
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Megan Gant
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Kyle Brown
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et al.
Journal articles
pasteur-04111608v1
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Best practices and benchmarks for intact protein analysis for top-down mass spectrometry
Daniel Donnelly
,
Catherine Rawlins
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Caroline Dehart
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Luca Fornelli
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Luis Schachner
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et al.
Journal articles
pasteur-02331018v1
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Interlaboratory Study for Characterizing Monoclonal Antibodies by Top-Down and Middle-Down Mass Spectrometry
Kristina Srzentić
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Luca Fornelli
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Yury Tsybin
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Joseph Loo
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Henrique Seckler
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et al.
Journal articles
pasteur-03070508v1
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A type IV pilus mediates DNA binding during natural transformation in Streptococcus pneumoniae.
Raphael Laurenceau
,
Gérard Péhau-Arnaudet
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Sonia Baconnais
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Joseph Gault
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Christian Malosse
,
et al.
Journal articles
hal-02370135v1
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Conserved Streptococcus pneumoniae Spirosomes Suggest a Single Type of Transformation Pilus in Competence
Raphaël Laurenceau
,
Petya V. Krasteva
,
Amy Diallo
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Sahra Ouarti
,
Magalie Duchateau
,
et al.
Journal articles
hal-03157387v1
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ProteoCombiner: integrating bottom-up with top-down proteomics data for improved proteoform assessment
Diogo Lima
,
Mathieu Dupré
,
Magalie Duchateau
,
Quentin Giai Gianetto
,
Martial Jean-Pierre Rey
,
et al.
Journal articles
pasteur-03014113v1
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Structural basis for loading and inhibition of a bacterial T6 SS phospholipase effector by the VgrG spike
Nicolas Flaugnatti
,
Chiara Rapisarda
,
Martial Rey
,
Solène G Beauvois
,
Viet Anh Nguyen
,
et al.
Journal articles
hal-02915537v1
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Evolution of Helicobacter: Acquisition by Gastric Species of Two Histidine-Rich Proteins Essential for Colonization
Daniel Vinella
,
Frédéric Fischer
,
Egor Vorontsov
,
Julien Gallaud
,
Christian Malosse
,
et al.
Journal articles
hal-01258641v1
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Using ProteoCombiner to integrate bottom-up and top-down proteomics data to improve proteoform identification
Diogo Borges Lima
,
Mathieu Dupré
,
Magalie Duchateau
,
Quentin Giai Gianetto
,
Martial Jean-Pierre Rey
,
et al.
2021
Preprints, Working Papers, ...
pasteur-03243560v1
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De Novo Sequencing of Antibody Light Chain Proteoforms from Patients with Multiple Myeloma
Mathieu Dupré
,
Magalie Duchateau
,
Rebecca Sternke-Hoffmann
,
Amelie Boquoi
,
Christian Malosse
,
et al.
Journal articles
pasteur-03395532v1
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Biogenesis and structure of a type VI secretion baseplate
Yassine Cherrak
,
Chiara Rapisarda
,
Riccardo Pellarin
,
Guillaume Bouvier
,
Benjamin Bardiaux
,
et al.
Journal articles
hal-02342924v1
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Bio-guided identification of proteins for the diagnosis of cysticercosis in swine
Priscilla Nativel
,
Anjanirina Rahantamalala
,
Sitraka Ramiandrisoa
,
Virginie Rasoamampianinaa
,
Magalie Duchateau
,
et al.
Journal articles
hal-03157375v1
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The COPII complex and lysosomal VAMP7 determine intracellular Salmonella localization and growth
José Carlos Santos
,
Magalie I Duchateau
,
Jennifer Fredlund
,
Allon Weiner
,
Adeline Mallet
,
et al.
Journal articles
pasteur-01899448v1
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The combination of electron capture dissociation and fixed charge derivatization increases sequence coverage for o-glycosylated and o-phosphorylated peptides.
Julia Chamot-Rooke
,
Guillaume van Der Rest
,
Alexandre Dalleu
,
Sylvie Bay
,
Jérôme Lemoine
Journal articles
istex
pasteur-00166621v1
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Characterization of homodimer interfaces with cross-linking mass spectrometry and isotopically labeled proteins
Diogo Lima
,
John Melchior
,
Jamie Morris
,
Valmir C Barbosa
,
Julia Chamot-Rooke
,
et al.
Journal articles
pasteur-02331100v1
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ProForma: A Standard Proteoform Notation
Richard Leduc
,
Veit Schwämmle
,
Michael Shortreed
,
Anthony Cesnik
,
Stefan Solntsev
,
et al.
Journal articles
pasteur-02331425v1
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Design and in vitro characterization of RXR variants as tools to investigate the biological role of endogenous rexinoids
Albane Le Maire
,
Martial Rey
,
Valérie Vivat
,
Laura Guée
,
Pauline Blanc
,
et al.
Journal articles
hal-03787368v1
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A step-by-step in crystallo guide to bond cleavage and 1,6-anhydro-sugar product synthesis by a peptidoglycan-degrading lytic transglycosylase
Allison H Williams
,
Richard Wheeler
,
Lesly Rateau
,
Christian Malosse
,
Julia Chamot-Rooke
,
et al.
Journal articles
pasteur-01950858v1
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Calmodulin fishing with a structurally disordered bait triggers CyaA catalysis
Darragh P. O'Brien
,
Dominique Durand
,
Alexis Voegele
,
Véronique Hourdel
,
Marilyne Davi
,
et al.
Journal articles
hal-02294928v1
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Expansion of nickel binding- and histidine-rich proteins during gastric adaptation of Helicobacter species
Frédéric Fischer
,
Egor Vorontsov
,
Evelyne Turlin
,
Christian Malosse
,
Camille Garcia
,
et al.
Journal articles
hal-03818858v1
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Structural and molecular determinants for the interaction of ExbB from Serratia marcescens and HasB, a TonB paralog
Valérie Biou
,
Ricardo Jorge Diogo Adaixo
,
Mohamed Chami
,
Pierre-Damien Coureux
,
Benoist Laurent
,
et al.
Journal articles
hal-03662822v1
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O-Glycosylation of the N-terminal region of the serine-rich adhesin Srr1 of Streptococcus agalactiae explored by mass spectrometry.
Thibault Chaze
,
Alain Guillot
,
Benoît Valot
,
Olivier Langella
,
Julia Chamot-Rooke
,
et al.
Journal articles
hal-01204448v1
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Extensive flavivirus E trimer breathing accompanies stem zippering of the post‐fusion hairpin
Iris Medits
,
Marie‐christine Vaney
,
Alexander Rouvinski
,
Martial Jean-Pierre Rey
,
Julia Chamot‐rooke
,
et al.
Journal articles
hal-02990225v1
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Regulation of NF-κB by the p105-ABIN2-TPL2 complex and RelAp43 during rabies virus infection
Benoit Besson
,
Florian Sonthonnax
,
Magalie Duchateau
,
Youcef Ben Khalifa
,
Florence Larrous
,
et al.
Journal articles
pasteur-02573147v1
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Calcium-dependent disorder-to-order transitions are central to the secretion and folding of the CyaA toxin of Bordetella pertussis, the causative agent of whooping cough
Darragh P. O'Brien
,
Ana Cristina Sotomayor Perez
,
Johanna Karst
,
Sara E. Cannella
,
Véronique Yvette Ntsogo Enguéné
,
et al.
Journal articles
hal-02183106v1
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Pseudopilin residue E5 is essential for recruitment by the type 2 secretion system assembly platform.
Mangayarkarasi Nivaskumar
,
Javier Santos-Moreno
,
Christian Malosse
,
Nathalie Nadeau
,
Julia Chamot-Rooke
,
et al.
Journal articles
pasteur-02282206v1
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Structural models of intrinsically disordered and calcium-bound folded states of a protein adapted for secretion
Darragh P. O’brien
,
Belen Hernandez
,
Dominique Durand
,
Véronique Hourdel
,
Ana-Cristina Sotomayor-Pérez
,
et al.
Journal articles
pasteur-01406897v1
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