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FISH-quant: automatic counting of transcripts in 3D FISH images
Florian Mueller
,
Adrien Senecal
,
Katjana Tantale
,
Hervé Marie-Nelly
,
Nathalie Ly
,
et al.
Journal articles
pasteur-01622707v1
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A choreography of centrosomal mRNAs reveals a conserved localization mechanism involving active polysome transport
Adham Safieddine
,
Emeline Coleno
,
Soha Salloum
,
Arthur Imbert
,
Abdel-Meneem Traboulsi
,
et al.
Journal articles
hal-03014936v2
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piRNAs initiate transcriptional silencing of spermatogenic genes during C. elegans germline development
Eric Cornes
,
Loan Bourdon
,
Meetali Singh
,
Florian Mueller
,
Piergiuseppe Quarato
,
et al.
Journal articles
pasteur-03514345v1
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Functional compensation precedes recovery of tissue mass following acute liver injury
Chad Walesky
,
Kellie Kolb
,
Carolyn Winston
,
Jake Henderson
,
Benjamin Kruft
,
et al.
Journal articles
pasteur-03648876v1
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Excessive self-grooming of $Shank3$ mutant mice is associated with gene dysregulation and imbalance between the striosome and matrix compartments in the striatum
Allain-Thibeault Ferhat
,
Anne Biton
,
Elisabeth Verpy
,
Benoit Forget
,
Fabrice de Chaumont
,
et al.
2022
Preprints, Working Papers, ...
hal-03803866v1
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Spatial transcriptomics for respiratory research and medicine
Sandra Curras-Alonso
,
Juliette Soulier
,
Thomas Walter
,
Florian Mueller
,
Arturo Londoño-Vallejo
,
et al.
Journal articles
hal-03376218v1
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Mitotic binding of Esrrb marks key regulatory regions of the pluripotency network
Nicola Festuccia
,
Agnès Dubois
,
Sandrine Vandormael-Pournin
,
Elena Gallego Tejeda
,
Adrien Mouren
,
et al.
Journal articles
pasteur-01972743v1
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Visualization of Arenavirus RNA Species in Individual Cells by Single-Molecule Fluorescence In Situ Hybridization Suggests a Model of Cyclical Infection and Clearance during Persistence
Benjamin R King
,
Aubin Samacoits
,
Philip L Eisenhauer
,
Christopher M. Ziegler
,
Emily A Bruce
,
et al.
Journal articles
pasteur-02075021v1
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A single-molecule view of transcription reveals convoys of RNA polymerases and multi-scale bursting
Katjana Tantale
,
Florian Müller
,
Alja Kozulic-Pirher
,
Annick Lesne
,
Jean-Marc Victor
,
et al.
Journal articles
pasteur-01622688v1
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A specific molecular signature in SARS-CoV-2 infected kidney biopsies
Pierre Isnard
,
Paul Vergnaud
,
Serge Garbay
,
Matthieu Jamme
,
Maeva Eloudzeri
,
et al.
Journal articles
pasteur-04004769v1
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A Deep Learning Approach To Identify MRNA Localization Patterns
Rémy Dubois
,
Arthur Imbert
,
Aubin Samacoits
,
Marion Peter
,
Edouard Bertrand
,
et al.
2019 IEEE 16th International Symposium on Biomedical Imaging (ISBI), Apr 2019, Venice, France. pp.1386-1390, ⟨10.1109/ISBI.2019.8759235⟩
Conference papers
hal-02343547v1
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Remodeling of the core leads HIV-1 pre-integration complex in the nucleus of human lymphocytes.
Guillermo Blanco-Rodriguez
,
Anastasia Gazi
,
Blandine Monel
,
Stella Frabetti
,
Viviana Scoca
,
et al.
Journal articles
pasteur-02548457v1
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Clustering and reverse transcription of HIV-1 genomes in nuclear niches of macrophages
Elena Rensen
,
Florian Mueller
,
Viviana Scoca
,
Jyotsana Parmar
,
Philippe Souque
,
et al.
2020
Preprints, Working Papers, ...
pasteur-02559460v1
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mRNA localization is linked to translation regulation in the Caenorhabditis elegans germ lineage
Dylan M Parker
,
Lindsay P Winkenbach
,
Samuel P Boyson
,
Matthew N Saxton
,
Camryn Daidone
,
et al.
Journal articles
pasteur-02559475v2
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The kinesin KIF1C transports APC-dependent mRNAs to cell protrusions
Xavier Pichon
,
Konstadinos Moissoglu
,
Emeline Coleno
,
Tianhong Wang
,
Arthur Imbert
,
et al.
Journal articles
hal-03371977v1
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HT-smFISH: a cost effective and flexible workflow for high-throughput single molecule RNA imaging
Adham Safieddine
,
Emeline Coleno
,
Frederic Lionneton
,
Abdel-Meneem Traboulsi
,
Soha Salloum
,
et al.
Journal articles
hal-03834928v1
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smiFISH and FISH-quant - a flexible single RNA detection approach with super-resolution capability.
Nikolay Tsanov
,
Aubin Samacoits
,
Racha Chouaib
,
Abdel-Meneem Traboulsi
,
Thierry Gostan
,
et al.
Journal articles
pasteur-01375913v1
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Visualization of single endogenous polysomes reveals the dynamics of translation in live human cells
Xavier Pichon
,
Amandine Bastide
,
Adham Safieddine
,
Racha Chouaib
,
Aubin Samacoits
,
et al.
Journal articles
pasteur-01622667v1
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Sensitive visualization of SARS-CoV-2 RNA with CoronaFISH
Elena Rensen
,
Stefano Pietropaoli
,
Florian Mueller
,
Christian Weber
,
Sylvie Souquere
,
et al.
Journal articles
pasteur-03518024v2
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FISH-quant v2: a scalable and modular tool for smFISH image analysis
Arthur Imbert
,
Wei Ouyang
,
Adham Safieddine
,
Emeline Coleno
,
Christophe Zimmer
,
et al.
Journal articles
hal-03942851v2
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The molecular logic of Nanog-induced self-renewal in mouse embryonic stem cells
Victor Heurtier
,
Nick Owens
,
Inma González
,
Florian Mueller
,
Caroline Proux
,
et al.
Journal articles
pasteur-02083187v1
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Co-translational assembly of mammalian nuclear multisubunit complexes
Ivanka Kamenova
,
Pooja Mukherjee
,
Sascha Conic
,
Florian Mueller
,
Farrah El-Saafin
,
et al.
Journal articles
hal-02130219v1
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Clustering and reverse transcription of HIV‐1 genomes in nuclear niches of macrophages
Elena Rensen
,
Florian Mueller
,
Viviana Scoca
,
Jyotsana Parmar
,
Philippe Souque
,
et al.
Journal articles
pasteur-03088393v1
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Transcription Factors Modulate c-Fos Transcriptional Bursts
Adrien Senecal
,
Brian Munsky
,
Florence Proux
,
Nathalie Ly
,
Floriane E. Braye
,
et al.
Journal articles
hal-01312884v1
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Single molecule tracking of Ace1p in Saccharomyces cerevisiae defines a characteristic residence time for non-specific interactions of transcription factors with chromatin
David A Ball
,
Gunjan D. Mehta
,
Ronit Salomon-Kent
,
Davide Mazza
,
Tatsuya Morisaki
,
et al.
Journal articles
pasteur-01622680v1
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Live single-cell transcriptional dynamics via RNA labelling during the phosphate response in plants
Sahar Hani
,
Laura Cuyas
,
Pascale David
,
David Secco
,
James Whelan
,
et al.
Journal articles
hal-03320179v1
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Germline inherited small RNAs facilitate the clearance of untranslated maternal mRNAs in C. elegans embryos
Piergiuseppe Quarato
,
Meetali Singh
,
Eric Cornes
,
Blaise Maxime Li
,
Loan Bourdon
,
et al.
Journal articles
hal-03163367v1
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