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authIdHal_s : bryan-brancotte
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High-Resolution Typing of Staphylococcus epidermidis Based on Core Genome Multilocus Sequence Typing To Investigate the Hospital Spread of Multidrug-Resistant Clones

Anne Jamet , Julien Guglielmini , Bryan Brancotte , Mathieu Coureuil , Daniel Euphrasie , et al.
Journal of Clinical Microbiology, 2021, 59 (3), ⟨10.1128/JCM.02454-20⟩
Journal articles hal-03218144v1
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Redesign of iPPI-DB, a database for modulators of Protein-Protein Interactions

Rachel Torchet , Alexandra Moine-Franel , Hélène Borges , Bryan Brancotte , Olivia Doppelt-Azeroual , et al.
JOBIM (Journées Ouvertes Biologie, Informatique et Mathématiques), Société Française de BioInformatique; GdR Bioinformatique Moléculaire; Institut Francais de Bioinformatique, Jul 2019, Nantes, France
Conference papers pasteur-02867265v1
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BioConvert: a comprehensive format converter for life sciences

Hugo Caro , Sulyvan Dollin , Anne Biton , Bryan Brancotte , Dimitri Desvillechabrol , et al.
2023
Preprints, Working Papers, ... pasteur-04126319v1
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Viral Host Range database, an online tool for recording, analyzing and disseminating virus-host interactions

Quentin Lamy-Besnier , Bryan Brancotte , Hervé Ménager , Laurent Debarbieux
Bioinformatics, 2021, 60 (4), pp.921-925. ⟨10.1093/bioinformatics/btab070⟩
Journal articles pasteur-03166905v1
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Community curation of bioinformatics software and data resources

Jon Ison , Hervé Ménager , Bryan Brancotte , Erik Jaaniso , Ahto Salumets , et al.
Briefings in Bioinformatics, 2019, pp.bbz075. ⟨10.1093/bib/bbz075⟩
Journal articles pasteur-02770716v1
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The iPPI-DB initiative: a community-centered database of protein–protein interaction modulators

Rachel Torchet , Karen Druart , Luis Checa Ruano , Alexandra Moine-Franel , Hélène Borges , et al.
Bioinformatics, 2021, 37 (1), pp.89-96. ⟨10.1093/bioinformatics/btaa1091⟩
Journal articles hal-03252561v1
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EDAM Browser: visualization of EDAM and annotated bioinformatics resources

Hager Eldakroury , Sakshi Dhamija , Rashika Rathi , Drashti Patoliya , Guneet Singh , et al.
BOSC, Jul 2021, Online, France
Conference poster hal-04122666v1
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A reusable tree-based web-visualization to browse EDAM ontology, and contribute to it.

Bryan Brancotte , Christophe Blanchet , Hervé Ménager
Journal of Open Source Software, 2018, 3 (27), pp.698. ⟨10.21105/joss.00698⟩
Journal articles pasteur-02770161v1
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A comprehensive resource for Bordetella genomic epidemiology and biodiversity studies

Sébastien Bridel , Valérie Bouchez , Bryan Brancotte , Sofia Hauck , Nathalie Armatys , et al.
Nature Communications, 2022, 13 (1), pp.3807. ⟨10.1038/s41467-022-31517-8⟩
Journal articles pasteur-03754631v1
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EDAM, the life-science ontology for data analysis and management

Lucie Lamothe , Alban Gaignard , Mads Kierkegaard , Hager Eldakroury , Melissa Black , et al.
JOBIM, Jul 2022, Rennes, France. ⟨10.5281/zenodo.6769072⟩
Conference poster hal-03702557v1
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Efficient, robust and effective rank aggregation for massive biological datasets

Pierre Andrieu , Bryan Brancotte , Laurent Bulteau , Sarah Cohen-Boulakia , Alain Denise , et al.
Future Generation Computer Systems, 2021, 124, pp.406-421. ⟨10.1016/j.future.2021.06.013⟩
Journal articles hal-03388443v1