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Author: personID (integer) : 764040

Leveraging the partition selection bias to achieve a high-quality clustering of mass spectra

André R.F. Silva , Diogo Lima , Louise Kurt , Mathieu Dupré , Julia Chamot-Rooke , et al.
Journal of Proteomics, 2021, 245, pp.104282. ⟨10.1016/j.jprot.2021.104282⟩
Journal articles pasteur-03441752v1

Interlaboratory Study for Characterizing Monoclonal Antibodies by Top-Down and Middle-Down Mass Spectrometry

Kristina Srzentić , Luca Fornelli , Yury Tsybin , Joseph Loo , Henrique Seckler , et al.
Journal of The American Society for Mass Spectrometry, 2020, 31 (9), pp.1783-1802. ⟨10.1021/jasms.0c00036⟩
Journal articles pasteur-03070508v1
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ProteoCombiner: integrating bottom-up with top-down proteomics data for improved proteoform assessment

Diogo Lima , Mathieu Dupré , Magalie Duchateau , Quentin Giai Gianetto , Martial Jean-Pierre Rey , et al.
Bioinformatics, 2020, pp.btaa958. ⟨10.1093/bioinformatics/btaa958⟩
Journal articles pasteur-03014113v1
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Using ProteoCombiner to integrate bottom-up and top-down proteomics data to improve proteoform identification

Diogo Borges Lima , Mathieu Dupré , Magalie Duchateau , Quentin Giai Gianetto , Martial Jean-Pierre Rey , et al.
Preprints, Working Papers, ... pasteur-03243560v1
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De Novo Sequencing of Antibody Light Chain Proteoforms from Patients with Multiple Myeloma

Mathieu Dupré , Magalie Duchateau , Rebecca Sternke-Hoffmann , Amelie Boquoi , Christian Malosse , et al.
Analytical Chemistry, 2021, 93 (30), pp.10627-10634. ⟨10.1021/acs.analchem.1c01955⟩
Journal articles pasteur-03395532v1
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[Short Communication] DiagnoTop: A Computational Pipeline for Discriminating Bacterial Pathogens without Database Search

Diogo Borges Lima , Mathieu Dupré , Marlon Dias Mariano Santos , Paulo Costa Carvalho , Julia Chamot-Rooke
Journal of The American Society for Mass Spectrometry, 2021, 32 (6), pp.1295-1299. ⟨10.1021/jasms.1c00014⟩
Journal articles pasteur-03441711v1
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TDFragMapper: a visualization tool for evaluating experimental parameters in top-down proteomics

Jonathan Dhenin , Diogo B Lima , Mathieu Dupré , Julia Chamot-Rooke
Bioinformatics, 2021, pp.btab784. ⟨10.1093/bioinformatics/btab784⟩
Journal articles pasteur-03441695v1

Top-Down Garbage Collector: a tool for selecting high-quality top-down proteomics mass spectra

Diogo Lima , André Silva , Mathieu Dupré , Marlon Santos , Milan Clasen , et al.
Bioinformatics, 2019, 35 (18), pp.3489-3490. ⟨10.1093/bioinformatics/btz085⟩
Journal articles pasteur-02330759v1

eXL-MS: An Enhanced Cross-Linking Mass Spectrometry Workflow To Study Protein Complexes

Martial Jean-Pierre Rey , Mathieu Dupré , Isabel Lopez-Neira , Magalie I Duchateau , Julia Chamot-Rooke
Analytical Chemistry, 2018, 90 (18), pp.10707-10714. ⟨10.1021/acs.analchem.8b00737⟩
Journal articles pasteur-02331078v1
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Optimization of a Top-Down Proteomics Platform for Closely Related Pathogenic Bacterial Discrimination

Mathieu Dupré , Magalie Duchateau , Christian Malosse , Diogo Borges-Lima , Valeria Calvaresi , et al.
Journal of Proteome Research, 2020, ⟨10.1021/acs.jproteome.0c00351⟩
Journal articles pasteur-03014101v1
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Advanced In Vivo Cross-Linking Mass Spectrometry Platform to Characterize Proteome-Wide Protein Interactions

Martial Jean-Pierre Rey , Jonathan Dhenin , Youxin Kong , Lucienne Nouchikian , Isaac Filella , et al.
Analytical Chemistry, 2021, 93 (9), pp.4166-4174. ⟨10.1021/acs.analchem.0c04430⟩
Journal articles hal-03157343v1
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Deep mutational scanning of the Neisseria meningitidis major pilin reveals the importance of pilus tip‐mediated adhesion

Paul Kennouche , Arthur Charles‐orszag , Daiki H Nishiguchi , Sylvie Goussard , Anne‐flore Imhaus , et al.
EMBO Journal, 2019, ⟨10.15252/embj.2019102145⟩
Journal articles pasteur-02332462v1