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authFullName_s : Vincent Mallet
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quicksom: Self-Organizing Maps on GPUs for clustering of molecular dynamics trajectories

Vincent Mallet , Michael Nilges , Guillaume Bouvier
Bioinformatics, 2021, 37 (14), pp.2064-2065. ⟨10.1093/bioinformatics/btaa925⟩
Journal articles hal-03122153v1
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Geometric deep learning for structural bioinformatics

Vincent Mallet
Bioinformatics [q-bio.QM]. Université Paris Cité, 2022. English. ⟨NNT : 2022UNIP7006⟩
Theses tel-03943950v1
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InDeep: 3D fully convolutional neural networks to assist in silico drug design on protein–protein interactions

Vincent Mallet , Luis Checa Ruano , Alexandra Moine Franel , Michael Nilges , Karen Druart , et al.
Bioinformatics, 2021, 38 (5), pp.1261 - 1268. ⟨10.1093/bioinformatics/btab849⟩
Journal articles pasteur-04102799v1
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Contributing factors and outcomes of burn-associated cholestasis

Christian de Tymowski , François Dépret , Sabri Soussi , Moreno Nabila , Thomas Vauchel , et al.
Journal of Hepatology, 2019, 71 (3), pp.563 - 572. ⟨10.1016/j.jhep.2019.05.009⟩
Journal articles hal-03488197v1

The burden of hepatitis E among patients with haematological malignancies

Johann von Felden , Laurent Alric , Sven Pischke , Celia Aitken , Stefan Schlabe , et al.
Journal of Hepatology, 2019, 71 (3), pp.465-472. ⟨10.1016/j.jhep.2019.04.022⟩
Journal articles hal-03365828v1

Inhibition of the dipeptidyl peptidase DPP4 (CD26) reveals IL-33-dependent eosinophil-mediated control of tumor growth

Clémence Hollande , Jeremy Boussier , James Ziai , Tamaki Nozawa , Vincent Bondet , et al.
Nature Immunology, 2019, 20 (3), pp.257-264. ⟨10.1038/s41590-019-0321-5⟩
Journal articles pasteur-02063831v1
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L’index FIB-4 pour faire le diagnostic de fibrose hépatique avancée au cours de la stéatose hépatique

Vincent Mallet , Lucia Parlati , Anaïs Vallet-Pichard , Benoit Terris , Emmanuel Tsochatzis , et al.
La Presse Médicale, 2019, 48 (12), pp.1484 - 1488. ⟨10.1016/j.lpm.2019.10.017⟩
Journal articles hal-03488833v1
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Safety of sitagliptin in treatment of hepatocellular carcinoma in chronic liver disease patients

Clémence Hollande , Jeremy Boussier , Estelle Mottez , Vincent Bondet , Tan Phuc Buivan , et al.
Liver Cancer International, 2021, pp.Online Version of Record before inclusion in an issue. ⟨10.1002/lci2.36⟩
Journal articles pasteur-03384283v1

Chronic hepatitis E in HIV/HBV coinfected patient: lack of power of sofosbuvir-ribavirin

Eve Todesco , Sophie Demeret , Ruxandra Calin , Anne-Marie Roque-Afonso , Vincent Thibault , et al.
AIDS. Official journal of the international AIDS Society, 2017, 31 (9), pp.1346--1348. ⟨10.1097/QAD.0000000000001474⟩
Journal articles hal-01560146v1
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Chronic Hepatitis E in Rheumatology and Internal Medicine Patients

Sven Pischke , Jean-Marie Peron , Moritz von Wulffen , Johann von Felden , Christoph Höner zu Siederdissen , et al.
Viruses, 2019, 11 (2), pp.186. ⟨10.3390/v11020186⟩
Journal articles hal-03597418v1

OptiMol : Optimization of Binding Affinities in Chemical Space for Drug Discovery

Jacques Boitreaud , Vincent Mallet , Carlos Oliver , Jérôme Waldispühl
Journal of Chemical Information and Modeling, 2020, 60 (12), pp.5658-5666. ⟨10.1021/acs.jcim.0c00833⟩
Journal articles hal-03122149v1
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Bystander hyperactivation of preimmune CD8+ T cells in chronic HCV patients.

Cécile Alanio , Francesco Nicoli , Philippe Sultanik , Tobias Flecken , Brieuc Perot , et al.
eLife, 2015, 4, pp.e07916. ⟨10.7554/eLife.07916⟩
Journal articles hal-01306801v1

Reverse-Complement Equivariant Networks for DNA Sequences

Vincent Mallet , Jean-Philippe Vert
2022
Preprints, Working Papers, ... hal-03510326v1
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Evidence for an antagonist form of the chemokine CXCL10 in patients chronically infected with HCV.

Armanda Casrouge , Jérémie Decalf , Mina Ahloulay , Cyril Lababidi , Hala Mansour , et al.
Journal of Clinical Investigation, 2011, 121 (1), pp.308-17. ⟨10.1172/JCI40594⟩
Journal articles pasteur-01402089v1
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Hepatitis E and Allogeneic Hematopoietic Stem Cell Transplantation: A French Nationwide SFGM-TC Retrospective Study

Aliénor Xhaard , Anne-Marie Roque-Afonso , Vincent Mallet , Patricia Ribaud , Stephanie Nguyen-Quoc , et al.
Viruses, 2019, 11 (7), pp.622. ⟨10.3390/v11070622⟩
Journal articles hal-02282649v1
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The gamma-glutamyl transpeptidase to platelet ratio (GPR) predicts significant liver fibrosis and cirrhosis in patients with chronic HBV infection in West Africa

Maud Lemoine , Yusuke Shimakawa , Shevanthi Nayagam , Mustapha Khalil , Penda Suso , et al.
Gut, 2016, 65 (8), pp.1369-1376. ⟨10.1136/gutjnl-2015-309260⟩
Journal articles pasteur-02875304v1

Apolipoprotein H expression is associated with IL28B genotype and viral clearance in hepatitis C virus infection

Melissa E. Laird , Amira Mohsen , Darragh Duffy , Rasha Mamdouh , Lenaig Lefouler , et al.
Journal of Hepatology, 2014, 61 (4), pp.770 - 776. ⟨10.1016/j.jhep.2014.05.040⟩
Journal articles pasteur-01384212v1
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Transfusion-Transmitted Hepatitis E Virus Infection in France

Pierre Gallian , Elodie Pouchol , Rachid Djoudi , Sébastien Lhomme , Lina Mouna , et al.
Transfusion Medicine Reviews, 2019, 33 (3), pp.146-153. ⟨10.1016/j.tmrv.2019.06.001⟩
Journal articles hal-02227820v1

Diagnostic accuracy of the gamma-glutamyl transpeptidase to platelet ratio (GPR) using transient elastography as a reference

Maud Lemoine , Mark Thursz , Vincent Mallet , Yusuke Shimakawa
Gut, 2016, 66 (1), pp.195-196. ⟨10.1136/gutjnl-2016-311554⟩
Journal articles pasteur-02875291v1

Human immunodeficiency virus and hepatitis C infections induce distinct immunologic imprints in peripheral mononuclear cells.

Michelina Nascimbeni , Thomas Montange , Helen K. W. Law , Vincent Mallet , Bertrand Saunier , et al.
Hepatology, 2010, 51 (1), pp.353. ⟨10.1002/hep.23165⟩
Journal articles pasteur-00458148v1
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Augmented base pairing networks encode RNA-small molecule binding preferences

Carlos Oliver , Vincent Mallet , Roman Sarrazin Gendron , Vladimir Reinharz , William l Hamilton , et al.
Nucleic Acids Research, 2020, 48 (14), pp.7690-7699. ⟨10.1093/nar/gkaa583⟩
Journal articles hal-03122151v1

Plasma apolipoprotein H limits HCV replication and associates with response to NS3 protease inhibitors-based therapy

Philippe Sultanik , Vincent Mallet , Sylvie Lagaye , Armanda Casrouge , Céline Dorival , et al.
Liver International, 2015, 35 (7), pp.1833 - 1844. ⟨10.1111/liv.12759⟩
Journal articles istex pasteur-01380846v1
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Inhibition of DPP4 activity in humans establishes its in vivo role in CXCL10 post‐translational modification: prospective placebo‐controlled clinical studies

Jérémie Decalf , Kristin V Tarbell , Armanda Casrouge , Jeffrey D Price , Grace Linder , et al.
EMBO Molecular Medicine, 2016, 8 (6), pp.679 - 683. ⟨10.15252/emmm.201506145⟩
Journal articles pasteur-01380633v1