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Role of Klebsiella pneumoniae Type VI secretion system (T6SS) in long-term gastrointestinal colonization
Thomas Merciecca
,
Stéphanie Bornes
,
Laurence Nakusi
,
Sébastien Theil
,
Olaya Rendueles
,
et al.
Article dans une revue
pasteur-03809977v1
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Selection for the bacterial capsule in the absence of biotic and abiotic aggressions depends on growth conditions
Amandine Buffet
,
Eduardo P. C. Rocha
,
Olaya Rendueles
2020
Pré-publication, Document de travail
pasteur-02991089v1
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In Silico Analysis of Usher Encoding Genes in Klebsiella pneumoniae and Characterization of Their Role in Adhesion and Colonization
Fida Khater
,
Damien Balestrino
,
Nicolas Charbonnel
,
Jean François Dufayard
,
Sylvain Brisse
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et al.
Article dans une revue
hal-01393629v1
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A Genomic Survey of Reb Homologs Suggests Widespread Occurrence of R-Bodies in Proteobacteria
Kasie Raymann
,
Louis-Marie Bobay
,
Thomas G. Doak
,
Michael Lynch
,
Simonetta Gribaldo
Article dans une revue
hal-01579027v1
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Atypical organizations and epistatic interactions of CRISPRs and cas clusters in genomes and their mobile genetic elements
Aude Bernheim
,
David Bikard
,
Marie Touchon
,
Eduardo Rocha
Article dans une revue
pasteur-02626502v1
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Phage-Plasmids Spread Antibiotic Resistance Genes through Infection and Lysogenic Conversion
Eugen Pfeifer
,
Rémy A. Bonnin
,
Eduardo Rocha
Article dans une revue
pasteur-03818031v1
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A matter of background: DNA repair pathways as a possible cause for the sparse distribution of CRISPR-Cas systems in bacteria
Aude Bernheim
,
David Bikard
,
Marie Touchon
,
Eduardo P C Rocha
Philosophical Transactions of the Royal Society B: Biological Sciences, 2019, 374 (1772), pp.20180088. ⟨10.1098/rstb.2018.0088⟩
Article dans une revue
hal-02329742v1
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Identification of Protein Secretion Systems in Bacterial Genomes Using MacSyFinder.
Sophie S. Abby
,
Eduardo P C Rocha
Article dans une revue
hal-01677379v1
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Exploring the diversity of listeria monocytogenes biofilm architecture by high-throughput confocal laser scanning microscopy and the predominance of the honeycomb-like morphotype
Morgan Guilbaud
,
Pascal Piveteau
,
Mickaël Desvaux
,
Sylvain Brisse
,
Romain Briandet
Article dans une revue
hal-01204409v1
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A Single Amino Acid Substitution Changes the Self-Assembly Status of a Type IV Piliation Secretin
N. N. Nickerson
,
S. S. Abby
,
E. P. C. Rocha
,
M. Chami
,
A. P. Pugsley
Article dans une revue
pasteur-01374952v1
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Bacillus subtilis, the model Gram-positive bacterium: 20years of annotation refinement
Rainer Borriss
,
Antoine Danchin
,
Colin R. Harwood
,
Claudine Médigue
,
Eduardo P. C. Rocha
,
et al.
Article dans une revue
cea-02291345v1
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Eco-Evolutionary Dynamics of Episomes among Ecologically Cohesive Bacterial Populations
Hong Xue
,
Otto X. Cordero
,
Francisco M. Camas
,
William Trimble
,
Folker Meyer
,
et al.
Article dans une revue
pasteur-01374963v1
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How capsules protect the cell, shape genetic exchanges and drive bacterial evolution
Matthieu Haudiquet
Thèse
tel-04076297v2
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Phage-inducible chromosomal minimalist islands (PICMIs), a novel family of small marine satellites of virulent phages
Rubén Barcia-Cruz
,
David Goudenège
,
Jorge Moura de Sousa
,
Damien Piel
,
Martial Marbouty
,
et al.
Article dans une revue
hal-04413133v1
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Whole genome-based population biology and epidemiological surveillance of Listeria monocytogenes
Alexandra Moura
,
Alexis Criscuolo
,
Hannes Pouseele
,
Mylène M. Maury
,
Alexandre Leclercq
,
et al.
Article dans une revue
pasteur-01415883v1
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Experimental evolution of rhizobia may lead to either extra- or intracellular symbiotic adaptation depending on the selection regime
Marta Marchetti
,
Camille Clerissi
,
Yasmine Yousfi
,
Carine Gris
,
Olivier Bouchez
,
et al.
Article dans une revue
hal-01607703v1
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Identification and analysis of integrons and cassette arrays in bacterial genomes
Jean Cury
,
Thomas Jové
,
Marie Touchon
,
Bertrand Néron
,
Eduardo Pc Rocha
Article dans une revue
pasteur-01374968v1
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Bacterial toxin-antitoxin systems: Translation inhibitors everywhere
Julien Guglielmini
,
Laurence van Melderen
Article dans une revue
hal-03259584v1
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Abundance and co-occurrence of extracellular capsules increase environmental breadth: Implications for the emergence of pathogens
Olaya Rendueles
,
Marc Garcia-Garcerà
,
Bertrand Néron
,
Marie Touchon
,
Eduardo P C Rocha
Article dans une revue
pasteur-01578349v1
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Comparative genomic analysis of Acinetobacter strains isolated from murine colonic crypts
Azadeh Saffarian
,
Marie Touchon
,
Céline Mulet
,
Régis R. Tournebize
,
Virginie Passet
,
et al.
Article dans une revue
pasteur-01570221v1
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Adaptation to novel spatially-structured environments is driven by the capsule and alters virulence-associated traits
Amandine Nucci
,
Eduardo Rocha
,
Olaya Rendueles
Article dans une revue
pasteur-03794548v1
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Recruitment of a Lineage-Specific Virulence Regulatory Pathway Promotes Intracellular Infection by a Plant Pathogen Experimentally Evolved into a Legume Symbiont
Delphine Capela
,
Marta Marchetti
,
Camille Clerissi
,
Anthony Perrier
,
Dorian Guetta
,
et al.
Article dans une revue
hal-02620519v1
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A Systematic and Functional Classification of Streptococcus pyogenes That Serves as a New Tool for Molecular Typing and Vaccine Development
Martina Sanderson-Smith
,
David de Oliveira
,
Julien Guglielmini
,
David Mcmillan
,
Therese Vu
,
et al.
Article dans une revue
hal-03259577v1
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Unlinked rRNA genes are widespread among Bacteria and Archaea
Tess E Brewer
,
Mads Albertsen
,
Arwyn Edwards
,
Rasmus H Kirkegaard
,
Eduardo P C Rocha
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et al.
Article dans une revue
hal-02363135v1
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Identification and characterization of thousands of bacteriophage satellites across bacteria
Jorge A Moura de Sousa
,
Alfred Fillol-Salom
,
José Penadés
,
Eduardo P.C. Rocha
Article dans une revue
hal-03838678v2
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MacSyFinder v2: Improved modelling and search engine to identify molecular systems in genomes
Bertrand Néron
,
Rémi Denise
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Charles Coluzzi
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Marie Touchon
,
Eduardo P.C. Rocha
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et al.
Article dans une revue
pasteur-04060331v2
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In-vivo loss of carbapenem resistance by extensively drug-resistant Klebsiella pneumoniae during treatment via porin expression modification
Suzanne Bialek-Davenet
,
Noémie Mayer
,
Julia Vergalli
,
Marion Duprilot
,
Sylvain Brisse
,
et al.
Article dans une revue
hal-01831725v1
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Bacteria have numerous distinctive groups of phage-plasmids with conserved phage and variable plasmid gene repertoires
Eugen Pfeifer
,
Jorge A Moura de Sousa
,
Marie Touchon
,
Eduardo P. C. Rocha
Article dans une revue
hal-03357369v1
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Real-time search of all bacterial and viral genomic data
Phelim Bradley
,
Henk C den Bakker
,
Eduardo P C Rocha
,
Gil Mcvean
,
Zamin Iqbal
Article dans une revue
hal-02329753v1
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Complete Nucleotide Sequence of Two Multidrug-Resistant IncR Plasmids from Klebsiella pneumoniae
Fabrice Compain
,
L. Frangeul
,
Laurence Drieux
,
Charlotte Verdet
,
Sylvain Brisse
,
et al.
Article dans une revue
pasteur-03252020v1
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